LAMMPS (27 Nov 2018)
  using 1 OpenMP thread(s) per MPI task
# small Peridynamic cylinder hit by projectile

units           si
boundary        s s s
atom_style      peri
atom_modify     map array
neighbor        0.0010 bin

# small target

lattice         sc 0.0005
Lattice spacing in x,y,z = 0.0005 0.0005 0.0005
region          target cylinder y 0.0 0.0 0.0050 -0.0050 0.0 units box
create_box      1 target
Created orthogonal box = (-0.005 -0.005 -0.005) to (0.005 0 0.005)
  2 by 1 by 2 MPI processor grid
create_atoms    1 region target
Created 3487 atoms
  Time spent = 0.000591278 secs

pair_style      peri/lps
pair_coeff      * * 14.9e9 14.9e9 0.0015001 0.0005 0.25
set             group all density 2200
  3487 settings made for density
set             group all volume 1.25e-10
  3487 settings made for volume
velocity        all set 0.0 0.0 0.0 sum no units box
fix             1 all nve

# spherical indenter to shatter target

variable        y0 equal 0.00155
variable        vy equal -100
variable        y equal "v_y0 + step*dt*v_vy"

fix             2 all indent 1e17 sphere 0.0000 v_y 0.0000 0.0015 units box

compute         1 all damage/atom
timestep        1.0e-7
thermo          100

#dump            1 all custom 100 dump.peri id type x y z c_1

#dump           2 all image 50 image.*.jpg type type #               axes yes 0.8 0.02 view 80 -30 adiam 0.0006
#dump_modify    2 pad 4

#dump           3 all movie 50 movie.mpg type type #               axes yes 0.8 0.02 view 80 -30 adiam 0.0006
#dump_modify    3 pad 4

run             1000
Neighbor list info ...
  update every 1 steps, delay 10 steps, check yes
  max neighbors/atom: 2000, page size: 100000
  master list distance cutoff = 0.0025001
  ghost atom cutoff = 0.0025001
  binsize = 0.00125005, bins = 9 5 9
  2 neighbor lists, perpetual/occasional/extra = 1 1 0
  (1) pair peri/lps, perpetual
      attributes: half, newton on
      pair build: half/bin/atomonly/newton
      stencil: half/bin/3d/newton
      bin: standard
  (2) fix PERI_NEIGH, occasional
      attributes: full, newton on
      pair build: full/bin/atomonly
      stencil: full/bin/3d
      bin: standard
Peridynamic bonds:
  total # of bonds = 335966
  bonds/atom = 96.3482
Per MPI rank memory allocation (min/avg/max) = 29.4 | 29.66 | 29.76 Mbytes
Step Temp E_pair E_mol TotEng Press Volume 
       0            0            0            0            0            0 5.0030006e-07 
     100 2.1708413e+26    2019616.1            0     17691833 2.0883757e+13 5.0030006e-07 
     200 2.6858201e+27     23091889            0 2.1699255e+08 2.5837916e+14 5.0030006e-07 
     300 7.7773248e+27     36337377            0 5.9781519e+08 5.5903929e+14 6.6957466e-07 
     400 1.2392524e+28     26946130            0 9.2161463e+08 5.8015586e+14 1.0280783e-06 
     500 1.6748989e+28     24398485            0 1.2335785e+09 5.5317919e+14 1.4572494e-06 
     600 2.1137718e+28     12455731            0 1.5384766e+09 5.144781e+14 1.9774354e-06 
     700 2.2843381e+28    3012521.8            0 1.6521724e+09 4.1591669e+14 2.6434138e-06 
     800  2.30994e+28      1986584            0 1.6696295e+09 3.1911076e+14 3.4839376e-06 
     900 2.3325118e+28     935517.5            0 1.684874e+09 2.5083968e+14 4.4754707e-06 
    1000 2.3453028e+28    646658.88            0 1.6938195e+09 1.9996924e+14 5.6447777e-06 
Loop time of 3.68562 on 4 procs for 1000 steps with 3487 atoms

97.8% CPU use with 4 MPI tasks x 1 OpenMP threads

MPI task timing breakdown:
Section |  min time  |  avg time  |  max time  |%varavg| %total
---------------------------------------------------------------
Pair    | 2.3895     | 2.9098     | 3.4454     |  22.8 | 78.95
Neigh   | 0.089031   | 0.10631    | 0.12931    |   5.1 |  2.88
Comm    | 0.084373   | 0.61215    | 1.1154     |  48.5 | 16.61
Output  | 0.00026274 | 0.00058717 | 0.0014296  |   0.0 |  0.02
Modify  | 0.030758   | 0.032229   | 0.034897   |   0.9 |  0.87
Other   |            | 0.02456    |            |       |  0.67

Nlocal:    871.75 ave 955 max 804 min
Histogram: 2 0 0 0 0 0 0 1 0 1
Nghost:    1052.5 ave 1144 max 960 min
Histogram: 2 0 0 0 0 0 0 0 0 2
Neighs:    94652.8 ave 98974 max 91771 min
Histogram: 1 1 0 0 1 0 0 0 0 1
FullNghs:  302269 ave 346070 max 260820 min
Histogram: 1 0 0 0 2 0 0 0 0 1

Total # of neighbors = 1209076
Ave neighs/atom = 346.738
Neighbor list builds = 31
Dangerous builds = 0

Please see the log.cite file for references relevant to this simulation

Total wall time: 0:00:03
